Postdoctoral Researcher (PostDoc) Text Mining for Biodiversity Knowledge | Wissenschaftler*in (PostDoc) (m/w/d) Text Mining für Biodiversitätswissen

Senckenberg Gesellschaft für Naturforschung

Müncheberg, Brandenburg, Deutschland
Published Sep 30, 2025
Full-time
Fixed-term

Job Summary

This Postdoctoral Researcher position at the Senckenberg German Entomological Institute (SDEI) in Müncheberg focuses on developing and applying advanced Text Mining methods to extract biodiversity-relevant information from historical and scientific texts, particularly in Entomology. The role involves designing and testing tools for identifying and linking central entities (taxa, collectors, locations), including disambiguation and semantic enrichment in biodiversity contexts. A core responsibility is building and optimizing workflows to analyze entomological texts, focusing on functional traits, historical contexts, and geographic distribution, and integrating this information into major biodiversity data infrastructures (e.g., DiSSCo, GBIF) adhering to FAIR principles and standards (RDF, Darwin Core). The ideal candidate holds a Master's degree in a relevant data science or biodiversity field, possesses strong scientific programming skills (Python), and is committed to Open Science. This is a unique opportunity to shape the research profile of the Entomology Information Center and build an independent scientific profile in biodiversity text analysis.

Required Skills

Education

Master's degree (Biodiversity Informatics, Geoinformatics, Data Sciences/NLP, Computational Linguistics, Taxonomy, or Ecology); Doctoral degree (PhD) is desirable.

Experience

  • Professional experience in Text Mining of scientific and historical documents
  • Professional experience in OCR post-processing and parsing historical texts
  • Professional experience in Named Entity Recognition and semantic annotation linked to external resources (e.g., Wikidata, GBIF, ORCID)
  • Publication record commensurate with career stage
  • Experience in contributing to or acquiring third-party funded projects (commensurate with experience level)
  • Desirable: Experience in international and interdisciplinary collaboration
  • Desirable: Experience working with historical and multilingual biodiversity texts

Languages

German (Basic)English (Fluent)

Additional

  • Location in Müncheberg (Brandenburg); Initial 3-year limited contract; Willingness to acquire German language skills is expected.